X2Go Bug report logs - #1496
PyMOL crashes x2goagent

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Package: x2goagent; Maintainer for x2goagent is X2Go Developers <x2go-dev@lists.x2go.org>; Source for x2goagent is src:nx-libs.

Reported by: Craig Morton <craig.morton@unimelb.edu.au>

Date: Mon, 14 Sep 2020 02:55:02 UTC

Severity: normal

Found in version

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Report forwarded to x2go-dev@lists.x2go.org, X2Go Developers <x2go-dev@lists.x2go.org>:
Bug#1496; Package x2goagent. (Mon, 14 Sep 2020 02:55:02 GMT) (full text, mbox, link).

Acknowledgement sent to Craig Morton <craig.morton@unimelb.edu.au>:
New Bug report received and forwarded. Copy sent to X2Go Developers <x2go-dev@lists.x2go.org>. (Mon, 14 Sep 2020 02:55:02 GMT) (full text, mbox, link).

Message #5 received at submit@bugs.x2go.org (full text, mbox, reply):

From: Craig Morton <craig.morton@unimelb.edu.au>
To: "submit@bugs.x2go.org" <submit@bugs.x2go.org>
Subject: PyMOL crashes x2goagent
Date: Mon, 14 Sep 2020 02:48:57 +0000
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Package: x2goagent

Starting the PyMOL molecular modelling program (www.pymol.org) opens the PyMOL window then immediately crashes the x2go session. The session can't be restarted.

Dumped core on crash is from x2goagent and has the following information:

Using host libthread_db library "/lib64/libthread_db.so.1".
Core was generated by `x2goagent -nolisten tcp -nolisten tcp -dpi 96 -D -auth /home/craig/.'.
Program terminated with signal 11, Segmentation fault.
#0  0x000055fb9673da3d in _mesa_update_framebuffer_visual ()

PyMOL runs just fine sitting at the computer, the crash only occurs with x2go. Tried under KDE and MATE in case it was a KDE issue, same result, same error.

Running on Centos7, kernel 3.10.0-1127.18.2.el7.x86_64

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